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Genetic Mutation Appears to Protect Some People from Deadly MRSA

Those who have the mutation clear an infection without an excessive immune response

Published September 12, 2019 | Updated September 16, 2019

Staph cells growing in lab
Staph cells growing in lab

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DURHAM, N.C. -- An inherited genetic tendency appears to increase the likelihood that a person can successfully fight off antibiotic-resistant staph infections, according to a study led by Duke Health researchers.

The finding adds important insights into the genetic factors that predispose some people to persistent methicillin-resistant Staphylococcus aureus (MRSA) infections and could lead to the development of better treatment options. 

“The increasing prevalence of antibiotic resistant staph infections has created an urgent need to better understand who is most susceptible to these difficult-to-treat S. aureus infections and why,” said Vance Fowler, M.D., professor in the departments of Medicine and Molecular Genetics and Microbiology at Duke. Fowler is senior author of a study appearing the week of Sept. 16 in the Proceedings of the National Academy of Sciences.

“This study provides strong evidence of a genetic variant that appears to help people with MRSA to resolve their blood stream infections,” Fowler said.

Fowler and colleagues analyzed two closely matched sets of patients by age, sex, health conditions and other risk factors for MRSA bloodstream infections. Sixty-eight patients were identified; half had a persistent MRSA infection and half had been able to clear the infection from their bloodstream.

They ran whole-exome sequencing on the patients and found a genetic variation that was evident in about 62% of the patients who cleared a MRSA infection vs. only 9% in those who had persistent infections.

This genetic mutation -- located in the DNMT3A region of chromosome 2p -- appears to allow a patient’s immune response to better resolve their MRSA bloodstream infection.

One of the immune components the DNMT3A mutation seems to affect is IL-10, an anti-inflammatory cytokine that reduces the host’s response to S. aureus infection. Researchers have learned that while the right amount of IL-10 is critical to regulate host response, too much is associated with tissue damage and even death. 

Among those who had the gene mutation, serum levels of IL-10 remained in check, suggesting that the host immune response was thus better able to clear the MRSA infection.

The researchers tested the finding in animal models by inhibiting methylation of the regulatory gene, which led to increased susceptibility to a staph infection. 

“Our study identifies a particular DNMT3A mutation that contributes to an increased ability to resolve MRSA infections,” Fowler said. “The mechanism for this appears to be increased methylation of gene regulatory regions, and reduced levels of the anti-inflammatory cytokine IL-10.”

In addition to Fowler, study authors include Felix Mba Medie, Batu K. Sharma-Kuinkel, Felicia Ruffin, Liana C. Chan, Maura Rossetti, Yu-Ling Chang, Lawrence P. Park, Arnold S. Bayer, Scott G. Filler, Richard Ahn, Elaine F. Reed, David Gjertson and Michael R. Yeaman.

The research received support from the National Institutes of Health (U01-AI124319, R01-AI068804, K24-AI093969). 
 

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